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Journal Articles Nature Methods Year : 2019

Assessment of network module identification across complex diseases

Sarvenaz Choobdar , Mehmet Ahsen , Jake Crawford , Mattia Tomasoni , Tao Fang , David Lamparter , Junyuan Lin , Benjamin Hescott , Xiaozhe Hu , Johnathan Mercer , Ted Natoli , Rajiv Narayan , Fabian Aicheler , Nicola Amoroso , Alex Arenas , Karthik Azhagesan , Aaron Baker , Michael Banf , Serafim Batzoglou , Anaïs Baudot (1, 2) , Roberto Bellotti , Keith A. Boroevich , Christine Brun (3) , Stanley Cai , Michael Caldera , Alberto Calderone , Gianni Cesareni , Weiqi Chen , Christine Chichester , Hongzhu Cui , Phuong Dao , Manlio De Domenico , Andi Dhroso , Gilles Didier , Mathew Divine , Antonio Del Sol , Xuyang Feng , Jose C. Flores-Canales , Santo Fortunato , Anthony Gitter , Anna Gorska , Yuanfang Guan , Alain Guénoche (1) , Sergio Gómez , Hatem Hamza , András Hartmann , Shan He , Anton Heijs , Julian Heinrich , Ying Hu , Xiaoqing Huang , V. Keith Hughitt , Minji Jeon , Lucas Jeub , Nathan T. Johnson , Keehyoung Joo , Insuk Joung , Sascha Jung , Susana G. Kalko , Piotr J. Kamola , Jaewoo Kang , Benjapun Kaveelerdpotjana , Minjun Kim , Yoo-Ah Kim , Oliver Kohlbacher , Dmitry Korkin , Kiryluk Krzysztof , Khalid Kunji , Zoltàn Kutalik , Sean Lang-Brown , Thuc Duy Le , Jooyoung Lee , Sunwon Lee , Juyong Lee , Dong Li , Jiuyong Li , Lin Liu , Antonis Loizou , Zhenhua Luo , Artem Lysenko , Tianle Ma , Raghvendra Mall , Tomasoni Mattia , Mario Medvedovic , Jörg Menche , Elisa Micarelli , Alfonso Monaco , Felix Müller , Oleksandr Narykov , Thea Norman , Sungjoon Park , Livia Perfetto , Dimitri Perrin , Stefano Pirrò , Teresa M. Przytycka , Xiaoning Qian , Karthik Raman , Daniele Ramazzotti , Emilie Ramsahai , Balaraman Ravindran , Philip Rennert , Charlotta Schärfe , Roded Sharan , Ning Shi , Wonho Shin , Hai Shu , Himanshu Sinha , Donna K. Slonim , Lionel Spinelli (3) , Suhas Srinivasan , Christine Suver , Damian Szklarczyk , Sabina Tangaro , Suresh Thiagarajan , Laurent Tichit (1) , Thorsten Tiede , Beethika Tripathi , Aviad Tsherniak , Tatsuhiko Tsunoda , Dénes Türei , Ehsan Ullah , Golnaz Vahedi , Alberto Valdeolivas , Jayaswal Vivek , Christian Von Mering , Andra Waagmeester , Bo Wang , Yijie Wang , Barbara A. Weir , Shana White , Sebastian Winkler , Ke Xu , Taosheng Xu , Chunhua Yan , Liuqing Yang , Kaixian Yu , Xiangtian Yu , Gaia Zaffaroni , Mikhail Zaslavskiy , Tao Zeng , Lu Zhang , Weijia Zhang , Lixia Zhang , Xinyu Zhang , Junpeng Zhang , Xin Zhou , Jiarui Zhou , Hongtu Zhu , Junjie Zhu , Guido Zuccon , Aravind Subramanian , Jitao D. Zhang , Gustavo Stolovitzky , Zoltán Kutalik , Kasper Lage , Donna Slonim , Julio Saez-Rodriguez , Lenore Cowen , Sven Bergmann , Daniel Marbach
Sarvenaz Choobdar
  • Function : Author
Mehmet Ahsen
  • Function : Author
Jake Crawford
  • Function : Author
Mattia Tomasoni
  • Function : Author
Tao Fang
  • Function : Author
David Lamparter
  • Function : Author
Junyuan Lin
  • Function : Author
Benjamin Hescott
  • Function : Author
Xiaozhe Hu
  • Function : Author
Johnathan Mercer
  • Function : Author
Ted Natoli
  • Function : Author
Rajiv Narayan
  • Function : Author
Fabian Aicheler
  • Function : Author
Nicola Amoroso
  • Function : Author
Alex Arenas
  • Function : Author
Karthik Azhagesan
  • Function : Author
Aaron Baker
  • Function : Author
Michael Banf
  • Function : Author
Serafim Batzoglou
  • Function : Author
Roberto Bellotti
  • Function : Author
Keith A. Boroevich
  • Function : Author
Christine Brun
Stanley Cai
  • Function : Author
Michael Caldera
  • Function : Author
Alberto Calderone
  • Function : Author
Gianni Cesareni
  • Function : Author
Weiqi Chen
  • Function : Author
Christine Chichester
  • Function : Author
Hongzhu Cui
  • Function : Author
Phuong Dao
  • Function : Author
Manlio De Domenico
  • Function : Author
Andi Dhroso
  • Function : Author
Gilles Didier
  • Function : Author
Mathew Divine
  • Function : Author
Antonio Del Sol
  • Function : Author
Xuyang Feng
  • Function : Author
Jose C. Flores-Canales
  • Function : Author
Santo Fortunato
  • Function : Author
Anthony Gitter
  • Function : Author
Anna Gorska
  • Function : Author
Yuanfang Guan
  • Function : Author
Alain Guénoche
  • Function : Author
  • PersonId : 975933
Sergio Gómez
  • Function : Author
Hatem Hamza
  • Function : Author
András Hartmann
  • Function : Author
Shan He
  • Function : Author
Anton Heijs
  • Function : Author
Julian Heinrich
  • Function : Author
Ying Hu
  • Function : Author
  • PersonId : 756166
  • IdRef : 154799637
Xiaoqing Huang
  • Function : Author
V. Keith Hughitt
  • Function : Author
Minji Jeon
  • Function : Author
Lucas Jeub
  • Function : Author
Nathan T. Johnson
  • Function : Author
Keehyoung Joo
  • Function : Author
Insuk Joung
  • Function : Author
Sascha Jung
  • Function : Author
Susana G. Kalko
  • Function : Author
Piotr J. Kamola
  • Function : Author
Jaewoo Kang
  • Function : Author
Benjapun Kaveelerdpotjana
  • Function : Author
Minjun Kim
  • Function : Author
Yoo-Ah Kim
  • Function : Author
Oliver Kohlbacher
  • Function : Author
Dmitry Korkin
  • Function : Author
Kiryluk Krzysztof
  • Function : Author
Khalid Kunji
  • Function : Author
Zoltàn Kutalik
  • Function : Author
Sean Lang-Brown
  • Function : Author
Thuc Duy Le
  • Function : Author
Jooyoung Lee
  • Function : Author
Sunwon Lee
  • Function : Author
Juyong Lee
  • Function : Author
Dong Li
  • Function : Author
  • PersonId : 759776
  • IdRef : 135672430
Jiuyong Li
  • Function : Author
Lin Liu
  • Function : Author
  • PersonId : 926311
Antonis Loizou
  • Function : Author
Zhenhua Luo
  • Function : Author
Artem Lysenko
  • Function : Author
Tianle Ma
  • Function : Author
Raghvendra Mall
  • Function : Author
Tomasoni Mattia
  • Function : Author
Mario Medvedovic
  • Function : Author
Jörg Menche
  • Function : Author
Elisa Micarelli
  • Function : Author
Alfonso Monaco
  • Function : Author
Felix Müller
  • Function : Author
Oleksandr Narykov
  • Function : Author
Thea Norman
  • Function : Author
Sungjoon Park
  • Function : Author
Livia Perfetto
  • Function : Author
Dimitri Perrin
  • Function : Author
Stefano Pirrò
  • Function : Author
Teresa M. Przytycka
  • Function : Author
Xiaoning Qian
  • Function : Author
Karthik Raman
  • Function : Author
Daniele Ramazzotti
  • Function : Author
Emilie Ramsahai
  • Function : Author
Balaraman Ravindran
  • Function : Author
Philip Rennert
  • Function : Author
Charlotta Schärfe
  • Function : Author
Roded Sharan
  • Function : Author
Ning Shi
  • Function : Author
Wonho Shin
  • Function : Author
Hai Shu
  • Function : Author
Himanshu Sinha
  • Function : Author
Donna K. Slonim
  • Function : Author
Suhas Srinivasan
  • Function : Author
Christine Suver
  • Function : Author
Damian Szklarczyk
  • Function : Author
Sabina Tangaro
  • Function : Author
Suresh Thiagarajan
  • Function : Author
Laurent Tichit
Thorsten Tiede
  • Function : Author
Beethika Tripathi
  • Function : Author
Aviad Tsherniak
  • Function : Author
Tatsuhiko Tsunoda
  • Function : Author
Dénes Türei
  • Function : Author
Ehsan Ullah
  • Function : Author
Golnaz Vahedi
  • Function : Author
Alberto Valdeolivas
Jayaswal Vivek
  • Function : Author
Christian Von Mering
  • Function : Author
Andra Waagmeester
Bo Wang
Yijie Wang
  • Function : Author
Barbara A. Weir
  • Function : Author
Shana White
  • Function : Author
Sebastian Winkler
  • Function : Author
Ke Xu
  • Function : Author
Taosheng Xu
  • Function : Author
Chunhua Yan
  • Function : Author
Liuqing Yang
  • Function : Author
Kaixian Yu
  • Function : Author
Xiangtian Yu
  • Function : Author
Gaia Zaffaroni
  • Function : Author
Mikhail Zaslavskiy
  • Function : Author
Tao Zeng
  • Function : Author
Lu Zhang
  • Function : Author
  • PersonId : 764723
  • IdRef : 200027433
Weijia Zhang
  • Function : Author
Lixia Zhang
  • Function : Author
Xinyu Zhang
  • Function : Author
Junpeng Zhang
  • Function : Author
Xin Zhou
  • Function : Author
Jiarui Zhou
  • Function : Author
Hongtu Zhu
  • Function : Author
Junjie Zhu
  • Function : Author
Guido Zuccon
  • Function : Author
Aravind Subramanian
  • Function : Author
Jitao D. Zhang
  • Function : Author
Gustavo Stolovitzky
  • Function : Author
Zoltán Kutalik
  • Function : Author
Kasper Lage
Donna Slonim
  • Function : Author
Julio Saez-Rodriguez
Lenore Cowen
  • Function : Author
Sven Bergmann
  • Function : Author
Daniel Marbach
  • Function : Author
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Dates and versions

hal-02333148 , version 1 (28-09-2023)

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Sarvenaz Choobdar, Mehmet Ahsen, Jake Crawford, Mattia Tomasoni, Tao Fang, et al.. Assessment of network module identification across complex diseases. Nature Methods, 2019, 16 (9), pp.843-852. ⟨10.1038/s41592-019-0509-5⟩. ⟨hal-02333148⟩
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